Update test output to work with HTSlib Number= PR htslib#1874#2468
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pd3 merged 1 commit intosamtools:developfrom Oct 23, 2025
Merged
Update test output to work with HTSlib Number= PR htslib#1874#2468pd3 merged 1 commit intosamtools:developfrom
pd3 merged 1 commit intosamtools:developfrom
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htslib#1874 changes `bcf_remove_allele_set()` so that it no longer removes format fields with Type=String, Number=G and the only value left is MISSING. This alters the output of a couple of the `bcftools view -a` tests as the `FGS` tag is kept with a MISSING value instead of being removed completely.
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PR samtools/htslib#1874 changes
bcf_remove_allele_set()so that it no longer removes format fields with Type=String, Number=G and the only value left is MISSING. This alters the output of a couple of thebcftools view -atests as theFGStag is kept with a MISSING value instead of being removed completely.N.B. To avoid test failures, samtools/htslib#1874 needs to be merged into HTSlib first, then this should go into BCFtools as soon as possible after.